Connect each supply pin (VDD_CDR, VIN, VDD_LDO) directly to the power or ground planes with a short via. The via is usually placed tangent to the landing pads of the supply pins with the shortest trace possible.
Power supply decoupling capacitors must be a small physical size (0402 or smaller) and placed close to the supply pins to minimize inductance. The capacitors are commonly placed on the bottom layer and share the ground of the EP (Exposed Pad).